InteracDome
Download Database Files
We provide the following sets of per-domain-position binding frequency values, which are described in detail in our paper. Briefly, these sets are:
- Representable-NR Interactions correspond to domain-ligand interactions that had nonredundant instances across three or more distinct PDB structures. We recommend using this collection to learn more about domain binding properties.
- Confident Interactions correspond to domain-ligand interactions that had nonredundant instances across three or more distinct PDB entries and achieved a cross-validated precision of at least 0.5. We recommend using this collection to annotate potential ligand-binding positions in protein sequences.
- Representable Interactions correspond to domain-ligand interactions that have at least one representative structure in the PDB.
Download Source Code
All source code to regenerate InteracDome values from co-complex structures is available at http://github.com/Singh-Lab/InteracDome